Search

HDR UK publication

Semantic computational analysis of anticoagulation use in atrial fibrillation from real world data

25 November 2019

Bean DM, Teo J, Wu H, Oliveira R, Patel R, Bendayan R, Shah AM, Dobson RJB, Scott PA. PloS one (2019) doi.org/10.1371/journal.pone.0225625 Abstract: Atrial fibrillation (AF) is the most common...

HDR UK publication

Ontology-based prediction of cancer driver genes

22 November 2019

Althubaiti S, Karwath A, Dallol A, Noor A, Alkhayyat SS, Alwassia R, Mineta K, Gojobori T, Beggs AD, Schofield PN, Gkoutos GV, Hoehndorf R. Scientific Reports (2019) 9: 17405 Identifying and...

HDR UK publication

PhenoScanner V2: an expanded tool for searching human genotype-phenotype associations

15 November 2019

Kamat MA, Blackshaw JA, Young R, Surendran P, Burgess S, Danesh J, Butterworth AS, Staley JR. Bioinformatics (Oxford, England) (2019) 35: 22, 4851–4853 Summary: PhenoScanner is a curated...

HDR UK publication

Natural language processing for disease phenotyping in UK primary care records for research: a pilot study in myocardial infarction and death

12 November 2019

Shah AD, Bailey E, Williams T, Denaxas S, Dobson R, Hemingway H. Journal of Biomedical Semantics (2019) 10: 20 Background Free text in electronic health records (EHR) may contain additional...

Fellow

Dr Watjana Lilaonitkul

Rutherford Fellow at UCL (University College London)

Dr Watjana Lilaonitkul’s research focuses on developing and implementing machine learning and computational statistical algorithms to analyse high-dimensional time-series health data for...

HDR UK publication

Machine Learning Predicts Accurately Mycobacterium tuberculosis Drug Resistance From Whole Genome Sequencing Data

26 September 2019

Wouter Deelder, Sofia Christakoudi, Jody Phelan, Ernest Diez Benavente, Susana Campino, Ruth McNerney, Luigi Palla and Taane G. Clark Frontiers in Genetics (2019), 10: 922. Technical...

HDR UK publication

A comparison of deep learning performance against health-care professionals in detecting diseases from medical imaging: a systematic review and meta-analysis

24 September 2019

Xiaoxuan Liu, Livia Faes, Aditya U Kale, Siegfried K Wagner, Dun Jack Fu, Alice Bruynseels, Thushika Mahendiran, Gabriella Moraes, Mohith Shamdas, Christoph Kern, Joseph R Ledsam, Martin K Schmid,...

HDR UK publication

Machine Learning to Predict the Likelihood of Acute Myocardial Infarction

10 September 2019

This paper won HDR UK Open Access Publication of the Month – click here to read why. Martin P. Than et al (please see full text for the many authors of this paper) Circulation (2019), 140(11):...

HDR UK publication

A validated natural language processing algorithm for brain imaging phenotypes from radiology reports in UK electronic health records

9 September 2019

Wheater E, Mair G, Sudlow C, Alex B, Grover C, Whiteley W. BMC Medical Informatics and Decision Making (2019) 19:184 BACKGROUND Manual coding of phenotypes in brain radiology reports is time...